BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004D11LP1|AL425254
(405 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1781 738 0.0
>3x_Contig1781
Length = 20717
Score = 738 bits (366), Expect = 0.0
Identities = 392/406 (96%), Gaps = 1/406 (0%)
Strand = Plus / Minus
Query: 1 ttwaaaaaggtccgtagcagaattgcatcccatctcatctcatcaccactttacaacatt 60
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11035 tttaaaaaggtccgtagcagaattgcatcccatctcatctcatcaccactttacaacatt 10976
Query: 61 acatatttgtacacatacatattctttctgtttcttaaacagcatgggactttatctcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10975 acatatttgtacacatacatattctttctgtttcttaaacagcatgggactttatctcca 10916
Query: 121 tgtctgtgacgtattattctarawagccatggtaaacgaatcmcawawatcgactcttaa 180
||||||||||||||||||||| | |||||||||||||||||| || | ||||||||||||
Sbjct: 10915 tgtctgtgacgtattattctagatagccatggtaaacgaatcccatatatcgactcttaa 10856
Query: 181 ttctttccaacatgatgcgaaa-sgtcctgwaagcgttaggaggctggccacagagtgga 239
|||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 10855 ttctttccaacatgatgcgaaagcgtcctgtaagcgttaggaggctggccacagagtgga 10796
Query: 240 tttgttgatcaagaatttaatcgttcttaccttattcacaacctttctattttgaaggcc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10795 tttgttgatcaagaatttaatcgttcttaccttattcacaacctttctattttgaaggcc 10736
Query: 300 agaaacagtaaccagccgtgtgtctgtgtttgtttttwatttattacattagagcatcat 359
||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 10735 agaaacagtaaccagccgtgtgtctgtgtttgttttttttttattactttagagcatcat 10676
Query: 360 caaataaatatactctctttgtagtgattgtgttcttcaacggsat 405
|| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 10675 catataaatatactctctttgtagtgattgtgttcttcaacggcat 10630
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3485
Number of Sequences: 1807
Number of extensions: 3485
Number of successful extensions: 327
Number of sequences better than 1.0e-20: 1
length of query: 405
length of database: 10,358,551
effective HSP length: 15
effective length of query: 390
effective length of database: 10,331,446
effective search space: 4029263940
effective search space used: 4029263940
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 49 (99.2 bits)